Structure | Length of observation | Do the expected RSEs hold?
Package: pkident 0.1.0
pkident: Structural and Practical Identifiability for Pharmacokinetic and Pharmacodynamic Models
Determines which parameters of pharmacokinetic and pharmacodynamic ordinary differential equation models can be identified from a given dosing and observation design, and which added measurement would make the others identifiable. Decisions are local and are stated as such.
Authors:
pkident_0.1.0.tar.gz
pkident_0.1.0.zip(r-4.7-any)pkident_0.1.0.zip(r-4.6-any)pkident_0.1.0.zip(r-4.5-any)
pkident_0.1.0.tgz(r-4.6-any)pkident_0.1.0.tgz(r-4.5-any)
pkident_0.1.0.tar.gz(r-4.7-any)pkident_0.1.0.tar.gz(r-4.6-any)
pkident_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
pkident/json (API)
| # Install 'pkident' in R: |
| install.packages('pkident', repos = c('https://daikikumakura.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/daikikumakura/pkident/issues
identifiabilitynlmixr2pharmacokineticspharmacometricspkpdrxode2
Last updated from:b0b8f5354e. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 193 | ||
| source / vignettes | OK | 415 | ||
| linux-release | OK | 187 | ||
| macos-release | OK | 191 | ||
| macos-oldrel | OK | 168 | ||
| windows-devel | OK | 201 | ||
| windows-release | OK | 154 | ||
| windows-oldrel | OK | 198 | ||
| wasm-release | OK | 120 |
Exports:as_tablebolus_doseclassify_profilescompare_designsexperimentinfusion_dosepkpd_modelpractical_identifiabilityreference_modelreference_modelsresidual_errorstructural_identifiability
Dependencies:armadillo4rbackportsBHcachemcheckmateclicpp11cpp4rcrayondata.tabledigestdparserfarverfastmapggplot2gluegtableinlineisobandlabelinglifecyclelotrimagrittrmemoisemirainanonextpillarpkgconfigPreciseSumsqs2R6RColorBrewerRcppRcppArmadilloRcppEigenRcppParallelrexrlangrxode2rxode2lincmtrxode2llS7scalessitmoStanHeadersstringfishsymenginesystibbleutf8vctrsviridisLitewithr
Case study: how long must PSA be followed to estimate regrowth?
Last update: 2026-10-05
Started: 2026-10-05
Case study: nimotuzumab target-mediated disposition
Data and model | 1. Structure is not the obstacle | 2. What these data determine | 3. Which measurement would determine the rest
Last update: 2026-10-05
Started: 2026-10-05
Structural identifiability of reference PK/PD models
A model, step by step | The acceptance set | Reading the results
Last update: 2026-10-05
Started: 2026-10-05
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Extract result tables | as_table as_table.pkident_designs as_table.pkident_practical as_table.pkident_profiles as_table.pkident_structural |
| Dose specifications | bolus_dose infusion_dose |
| Classify likelihood profiles of an nlmixr2 fit | classify_profiles |
| Compare candidate designs | compare_designs |
| One experiment of a design | experiment |
| Define a model for identifiability analysis | pkpd_model |
| Practical identifiability for a given design | practical_identifiability |
| Reference models with known identifiability | reference_model reference_models |
| Residual error model | residual_error |
| Structural identifiability | structural_identifiability |