pkident - Structural and Practical Identifiability for Pharmacokinetic and Pharmacodynamic Models
Determines which parameters of pharmacokinetic and pharmacodynamic ordinary differential equation models can be identified from a given dosing and observation design, and which added measurement would make the others identifiable. Decisions are local and are stated as such.
Last updated
identifiabilitynlmixr2pharmacokineticspharmacometricspkpdrxode2
3.65 scorersemflow - Metadata-Driven Downstream Analysis for RSEM Gene-Level Results
A command-line and R interface for reproducible downstream analysis of RSEM gene-level expression estimates. 'rsemflow' imports '*.genes.results' files together with ordinary sample metadata, computes expression-level summaries, normalization, principal component analysis, sample correlation, 'DESeq2' differential expression, preranked gene set enrichment analysis, 'GSVA' or 'ssGSEA' pathway scores, and Ensembl gene annotation. Every result is written as a tab-separated table; the package does not draw figures.
Last updated
rnaseqdifferentialexpressiongenesetenrichmenttranscriptomicsbioinformaticsdeseq2gsearna-seqrsem
3.60 score 1 starsretiaudit - Inspect Python Selection Hints Without Starting Python
A read-only preflight for Python environment selection with reticulate. Identifies explicit overrides, project-local environment hints, and conflicts with a requested managed environment. Produces a report that omits local paths and environment values. Does not initialize Python, discover interpreters, install software, or modify configuration.
Last updated
diagnosticspythonreticulate
2.18 score 1 scripts